STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_26383HTH myb-type domain-containing protein. (1722 aa)    
Predicted Functional Partners:
BDEG_28183
WD_REPEATS_REGION domain-containing protein.
   
 0.816
BDEG_20808
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.613
BDEG_20570
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.613
BDEG_20991
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.613
BDEG_25627
Ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
    
   0.575
BDEG_27778
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.571
BDEG_22476
Ribosomal protein L15.
    
 
 0.569
BDEG_27799
CYCLIN domain-containing protein.
    
 0.565
BDEG_26532
Uncharacterized protein.
    
 
 0.561
BDEG_28349
Uncharacterized protein.
   
 
  0.556
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.