STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_26859Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
BDEG_28124
Uncharacterized protein.
    
 0.977
BDEG_20629
Uncharacterized protein.
    
 
 0.752
BDEG_25818
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.575
BDEG_26450
Uncharacterized protein.
     
 0.560
BDEG_21442
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.538
BDEG_25697
Uncharacterized protein.
    
 
 0.486
BDEG_26215
DRMBL domain-containing protein.
    
 
 0.486
BDEG_27333
Uncharacterized protein.
    
 
 0.486
BDEG_28112
Uncharacterized protein.
    
 
 0.486
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.