STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_27096Uncharacterized protein. (617 aa)    
Predicted Functional Partners:
BDEG_23679
AMPKBI domain-containing protein.
   
 0.841
BDEG_26668
AMPK1_CBM domain-containing protein.
   
 0.841
BDEG_26103
Tryptophan synthase.
  
 
 0.825
BDEG_24988
Indole-3-glycerol phosphate synthase.
  
 
 0.812
BDEG_21841
Uncharacterized protein.
   
 0.729
BDEG_21555
Protein kinase domain-containing protein.
   
 0.729
BDEG_22375
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.729
BDEG_22385
Protein kinase domain-containing protein.
   
 0.729
BDEG_22695
Protein kinase domain-containing protein.
   
 0.729
BDEG_23732
Non-specific serine/threonine protein kinase.
   
 0.729
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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