Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDEG_20445 | BDEG_21851 | A0A177W967 | A0A177WCR8 | WD_REPEATS_REGION domain-containing protein. | Sld5 domain-containing protein. | 0.985 |
BDEG_20445 | BDEG_22916 | A0A177W967 | A0A177WG09 | WD_REPEATS_REGION domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.993 |
BDEG_20445 | BDEG_25744 | A0A177W967 | A0A177WQU9 | WD_REPEATS_REGION domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.992 |
BDEG_20445 | BDEG_27007 | A0A177W967 | A0A177WU90 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.973 |
BDEG_20445 | BDEG_27011 | A0A177W967 | A0A177WU93 | WD_REPEATS_REGION domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.995 |
BDEG_20445 | BDEG_27051 | A0A177W967 | A0A177WWD2 | WD_REPEATS_REGION domain-containing protein. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.989 |
BDEG_20445 | BDEG_27744 | A0A177W967 | A0A177WX66 | WD_REPEATS_REGION domain-containing protein. | MCM domain-containing protein; Belongs to the MCM family. | 0.992 |
BDEG_20445 | BDEG_28461 | A0A177W967 | A0A177X0M0 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.992 |
BDEG_20445 | BDEG_28476 | A0A177W967 | A0A177WZ26 | WD_REPEATS_REGION domain-containing protein. | Sld5 domain-containing protein. | 0.964 |
BDEG_20445 | MCM7 | A0A177W967 | A0A177WLK6 | WD_REPEATS_REGION domain-containing protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.970 |
BDEG_21851 | BDEG_20445 | A0A177WCR8 | A0A177W967 | Sld5 domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.985 |
BDEG_21851 | BDEG_22916 | A0A177WCR8 | A0A177WG09 | Sld5 domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.992 |
BDEG_21851 | BDEG_25744 | A0A177WCR8 | A0A177WQU9 | Sld5 domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.987 |
BDEG_21851 | BDEG_27007 | A0A177WCR8 | A0A177WU90 | Sld5 domain-containing protein. | Uncharacterized protein. | 0.999 |
BDEG_21851 | BDEG_27011 | A0A177WCR8 | A0A177WU93 | Sld5 domain-containing protein. | DNA helicase; Belongs to the MCM family. | 0.992 |
BDEG_21851 | BDEG_27051 | A0A177WCR8 | A0A177WWD2 | Sld5 domain-containing protein. | DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. | 0.999 |
BDEG_21851 | BDEG_27744 | A0A177WCR8 | A0A177WX66 | Sld5 domain-containing protein. | MCM domain-containing protein; Belongs to the MCM family. | 0.992 |
BDEG_21851 | BDEG_28461 | A0A177WCR8 | A0A177X0M0 | Sld5 domain-containing protein. | Uncharacterized protein. | 0.995 |
BDEG_21851 | BDEG_28476 | A0A177WCR8 | A0A177WZ26 | Sld5 domain-containing protein. | Sld5 domain-containing protein. | 0.999 |
BDEG_21851 | MCM7 | A0A177WCR8 | A0A177WLK6 | Sld5 domain-containing protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.989 |
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