STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDEG_277794-hydroxybenzoate polyprenyl transferase. (159 aa)    
Predicted Functional Partners:
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
 
 0.911
BDEG_25177
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.893
BDEG_28141
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.889
BDEG_20984
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.887
BDEG_21332
Uncharacterized protein.
 
    
 0.885
BDEG_26514
Uncharacterized protein.
    
 0.873
BDEG_26307
Protoheme IX farnesyltransferase.
    
 0.869
BDEG_20002
Uncharacterized protein.
  
 
 0.854
BDEG_26031
Eukaryotic translation initiation factor 2 subunit gamma.
    
 0.849
BDEG_20723
4-hydroxyphenylpyruvate dioxygenase.
     
 0.828
Your Current Organism:
Batrachochytrium dendrobatidis JEL423
NCBI taxonomy Id: 403673
Other names: B. dendrobatidis JEL423
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