Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PITG_00953 | PITG_01683 | D0MS35 | D0MTU0 | Trafficking protein particle complex subunit 6B. | Foie-gras_1 domain-containing protein. | 0.998 |
PITG_00953 | PITG_02673 | D0MS35 | D0MWY0 | Trafficking protein particle complex subunit 6B. | Uncharacterized protein. | 0.990 |
PITG_00953 | PITG_03586 | D0MS35 | D0MXZ7 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.999 |
PITG_00953 | PITG_04719 | D0MS35 | D0N1W2 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit 2-like protein. | 0.999 |
PITG_00953 | PITG_04870 | D0MS35 | D0N285 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.999 |
PITG_00953 | PITG_09430 | D0MS35 | D0NBZ3 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit 2, putative. | 0.999 |
PITG_00953 | PITG_13986 | D0MS35 | D0NN94 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.999 |
PITG_00953 | PITG_14806 | D0MS35 | D0NP33 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. | 0.999 |
PITG_00953 | PITG_17068 | D0MS35 | D0NUY2 | Trafficking protein particle complex subunit 6B. | Uncharacterized protein. | 0.999 |
PITG_00953 | PITG_19168 | D0MS35 | D0NZ04 | Trafficking protein particle complex subunit 6B. | Uncharacterized protein. | 0.993 |
PITG_01683 | PITG_00953 | D0MTU0 | D0MS35 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit 6B. | 0.998 |
PITG_01683 | PITG_02673 | D0MTU0 | D0MWY0 | Foie-gras_1 domain-containing protein. | Uncharacterized protein. | 0.990 |
PITG_01683 | PITG_03586 | D0MTU0 | D0MXZ7 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.999 |
PITG_01683 | PITG_04719 | D0MTU0 | D0N1W2 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit 2-like protein. | 0.999 |
PITG_01683 | PITG_04870 | D0MTU0 | D0N285 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.998 |
PITG_01683 | PITG_09430 | D0MTU0 | D0NBZ3 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit 2, putative. | 0.998 |
PITG_01683 | PITG_13986 | D0MTU0 | D0NN94 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.998 |
PITG_01683 | PITG_14806 | D0MTU0 | D0NP33 | Foie-gras_1 domain-containing protein. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. | 0.999 |
PITG_01683 | PITG_17068 | D0MTU0 | D0NUY2 | Foie-gras_1 domain-containing protein. | Uncharacterized protein. | 0.999 |
PITG_01683 | PITG_19168 | D0MTU0 | D0NZ04 | Foie-gras_1 domain-containing protein. | Uncharacterized protein. | 0.998 |
page 1 of 6