STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02992Tyrosine--tRNA ligase. (428 aa)    
Predicted Functional Partners:
PITG_16328
Tyrosyl-tRNA synthetase, putative.
    
 0.951
PITG_00221
Tryptophan synthase, putative; Belongs to the TrpA family.
  
  
 0.773
PITG_05805
Tryptophan synthase.
  
  
 0.773
PITG_00302
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.746
PITG_17607
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 
 0.745
PITG_03093
FDX-ACB domain-containing protein.
  
  
 0.740
PITG_18303
Aspartyl-tRNA synthetase, putative.
  
 
 0.724
PITG_00967
tRNA-binding domain-containing protein.
  
 
 0.712
PITG_11111
Leucyl-tRNA synthetase, cytoplasmic, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.712
PITG_12486
tRNA-binding domain-containing protein.
  
 
 0.712
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.