STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04760Crinkler (CRN) family protein, putative. (735 aa)    
Predicted Functional Partners:
PITG_04261
ATP-binding Cassette (ABC) Superfamily.
      
 0.757
PITG_08173
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.757
PITG_08226
Amino Acid-Polyamine-Organocation (APC) Family.
      
 0.757
PITG_12253
Uncharacterized protein.
      
 0.757
PITG_14006
N-acetyltransferase, putative.
      
 0.757
PITG_10287
Adenylate cyclase, putative.
      
 0.408
PITG_08165
Uncharacterized protein.
      
 0.402
PITG_22016
START domain-containing protein.
      
 0.402
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.