STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_050115A endo-1,4-betaglucanase, putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (542 aa)    
Predicted Functional Partners:
PITG_17007
Cellulose synthase catalytic subunit [UDP-forming], putative.
  
  
  0.736
PITG_15791
Glycoside hydrolase, putative.
    
 0.696
PITG_03135
Lysosomal beta glucosidase, putative.
     
  0.650
PITG_03136
Glycoside hydrolase, putative.
     
  0.650
PITG_03140
Glycoside hydrolase, putative.
     
  0.650
PITG_03141
Lysosomal beta glucosidase, putative.
     
  0.650
PITG_03213
Glycoside hydrolase, putative.
     
  0.650
PITG_03411
Lysosomal beta glucosidase, putative.
     
  0.650
PITG_05065
Glycoside hydrolase, putative.
     
  0.650
PITG_05066
Glycoside hydrolase, putative.
     
  0.650
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.