STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_22770M96 mating-specific protein, putative. (316 aa)    
Predicted Functional Partners:
PITG_16107
rRNA biogenesis protein rrp5.
  
 0.589
PITG_09439
Sas10 domain-containing protein.
   
 0.561
PITG_02725
WD_REPEATS_REGION domain-containing protein.
   
 0.556
PITG_14730
Nucleolar protein, putative.
   
 0.549
PITG_15653
Small nuclear ribonucleoprotein G.
   
  0.541
PITG_00142
Ribosome biogenesis protein NEP1, putative.
   
 0.534
PITG_02450
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.534
PITG_11796
Digestive organ expansion factor.
   
 0.534
PITG_14284
Uncharacterized protein.
   
 0.530
PITG_01019
U3 small nucleolar RNA-associated protein, putative.
   
 0.528
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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