Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PITG_00223 | PITG_05679 | D0MQ92 | D0N3F2 | DNA repair and recombination protein RAD54. | Replication protein A subunit. | 0.717 |
PITG_00223 | PITG_07299 | D0MQ92 | D0N7R4 | DNA repair and recombination protein RAD54. | RECA_2 domain-containing protein. | 0.875 |
PITG_00223 | PITG_09305 | D0MQ92 | D0NBD6 | DNA repair and recombination protein RAD54. | DNA repair protein RAD51. | 0.777 |
PITG_00223 | PITG_09780 | D0MQ92 | D0NCT3 | DNA repair and recombination protein RAD54. | BRCA-2_OB1 domain-containing protein. | 0.562 |
PITG_00223 | PITG_10592 | D0MQ92 | D0NFP0 | DNA repair and recombination protein RAD54. | DEAD/DEAH box RNA helicase, putative. | 0.812 |
PITG_00223 | PITG_11154 | D0MQ92 | D0NGB1 | DNA repair and recombination protein RAD54. | Uncharacterized protein. | 0.922 |
PITG_00223 | PITG_13457 | D0MQ92 | D0NM20 | DNA repair and recombination protein RAD54. | DNA repair protein XRCC3. | 0.642 |
PITG_00223 | PITG_14397 | D0MQ92 | D0NPR2 | DNA repair and recombination protein RAD54. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.596 |
PITG_00223 | PITG_18642 | D0MQ92 | D0NYK2 | DNA repair and recombination protein RAD54. | UmuC domain-containing protein. | 0.499 |
PITG_00223 | PITG_19165 | D0MQ92 | D0NZ01 | DNA repair and recombination protein RAD54. | DNA repair and recombination protein radA, putative; Belongs to the RecA family. | 0.777 |
PITG_05679 | PITG_00223 | D0N3F2 | D0MQ92 | Replication protein A subunit. | DNA repair and recombination protein RAD54. | 0.717 |
PITG_05679 | PITG_07299 | D0N3F2 | D0N7R4 | Replication protein A subunit. | RECA_2 domain-containing protein. | 0.905 |
PITG_05679 | PITG_09305 | D0N3F2 | D0NBD6 | Replication protein A subunit. | DNA repair protein RAD51. | 0.785 |
PITG_05679 | PITG_09780 | D0N3F2 | D0NCT3 | Replication protein A subunit. | BRCA-2_OB1 domain-containing protein. | 0.621 |
PITG_05679 | PITG_10592 | D0N3F2 | D0NFP0 | Replication protein A subunit. | DEAD/DEAH box RNA helicase, putative. | 0.999 |
PITG_05679 | PITG_11154 | D0N3F2 | D0NGB1 | Replication protein A subunit. | Uncharacterized protein. | 0.587 |
PITG_05679 | PITG_13457 | D0N3F2 | D0NM20 | Replication protein A subunit. | DNA repair protein XRCC3. | 0.851 |
PITG_05679 | PITG_14397 | D0N3F2 | D0NPR2 | Replication protein A subunit. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.967 |
PITG_05679 | PITG_18642 | D0N3F2 | D0NYK2 | Replication protein A subunit. | UmuC domain-containing protein. | 0.822 |
PITG_05679 | PITG_19165 | D0N3F2 | D0NZ01 | Replication protein A subunit. | DNA repair and recombination protein radA, putative; Belongs to the RecA family. | 0.785 |
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