STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_07318Mitochondrial GTPase 1. (314 aa)    
Predicted Functional Partners:
PITG_09753
Uncharacterized protein.
  
 
 0.979
PITG_11923
Mitochondrial 39-S ribosomal protein L47, putative.
    
 
 0.973
PITG_15288
EngB-type G domain-containing protein.
  
 
 0.963
PITG_11734
50S ribosomal protein L3-2.
   
 
 0.955
PITG_15090
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.954
PITG_19007
Uncharacterized protein.
    
 
 0.950
PITG_09445
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.948
PITG_03420
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.947
PITG_02494
L51_S25_CI-B8 domain-containing protein.
    
   0.946
PITG_19448
50S ribosomal protein L17, putative; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.946
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.