STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_07550Secreted RxLR effector peptide protein, putative. (238 aa)    
Predicted Functional Partners:
PITG_07558
Secreted RxLR effector peptide protein, putative.
      
 0.750
PITG_07566
Secreted RxLR effector peptide protein, putative.
      
 0.731
PITG_07569
Secreted RxLR effector peptide protein, putative.
      
 0.539
Avr10
RxLR effector protein Avr10; Secreted effector that acts as an elicitor of hypersensitive response (HR) specifically on plants carrying defense protein R10. Enhances P.infestans colonization of Nicotiana benthamiana leaves.
      
 0.404
PexRD24
RxLR effector protein PexRD24; Effector that interacts with isoforms of host protein phosphatase type 1c (PP1c), mimicking a regulatory subunit and causing their re-localization within the host nucleus. The holoenzymes formed with PP1c isoforms act to promote late blight by attenuating jasmonic acid (JA)- and salicylic acid (SA)-mediated transcriptional responses of the host plant.
      
 0.400
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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