STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_0790326S proteasome non-ATPase regulatory subunit, putative. (264 aa)    
Predicted Functional Partners:
PITG_00014
26S proteasome non-ATPase regulatory subunit 13, putative.
   
 0.999
PITG_01797
26S protease regulatory subunit 6A-A; Belongs to the AAA ATPase family.
   
 0.999
PITG_02339
26S proteasome non-ATPase regulatory subunit 12, putative.
   
 0.999
PITG_11063
26S proteasome non-ATPase regulatory subunit 7.
   
 0.999
PITG_10883
26S proteasome non-ATPase regulatory subunit, putative.
   
 0.999
PITG_18446
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.999
PITG_00172
Proteasome subunit alpha type.
   
 0.998
PITG_08014
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.998
PITG_08210
Proteasome subunit beta type-3, putative.
   
 0.998
PITG_07887
26S proteasome non-ATPase regulatory subunit 6.
   
 0.998
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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