STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_08299Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
PITG_10592
DEAD/DEAH box RNA helicase, putative.
    
 
 0.863
PITG_08918
TYR_PHOSPHATASE_2 domain-containing protein.
    
 
 0.607
PITG_05586
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 0.606
PITG_22991
Uncharacterized protein.
  
 0.606
PITG_16834
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 0.606
PITG_20891
Uncharacterized protein.
  
 0.606
PITG_01216
DNA_binding_1 domain-containing protein.
  
  
 0.605
PITG_22191
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
  
  
 0.511
PITG_06352
Uncharacterized protein.
   
 
  0.503
PITG_13491
Calcineurin-like phosphoesterase, putative; Belongs to the 5'-nucleotidase family.
   
 
  0.503
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.