STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_09782Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (679 aa)    
Predicted Functional Partners:
PITG_15154
ANK_REP_REGION domain-containing protein.
  
 
   0.531
PITG_03485
ANK_REP_REGION domain-containing protein.
  
 
   0.528
PITG_08187
Ankyrin-like protein.
  
 
   0.523
PITG_08456
Ankyrin-like protein.
  
 
   0.523
PITG_17510
ANK_REP_REGION domain-containing protein.
  
 
   0.523
PITG_03163
Uncharacterized protein.
  
 
   0.515
PITG_03436
ANK_REP_REGION domain-containing protein.
  
 
   0.512
PITG_22038
ANK_REP_REGION domain-containing protein.
  
     0.512
PITG_09471
F-box protein, putative.
  
 
   0.506
PITG_13389
ANK_REP_REGION domain-containing protein.
  
 
   0.504
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.