STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_14215Carbohydrate esterase, putative. (314 aa)    
Predicted Functional Partners:
PITG_09445
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.545
PITG_05840
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.493
PITG_18776
Cytochrome c1, mitochondrial.
    
 0.482
PITG_00203
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
    
 
 0.461
PITG_11036
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit, putative.
  
   0.451
PITG_19649
Endopolygalacturonase, putative.
    
 0.450
PITG_19985
Endopolygalacturonase, putative.
    
 0.450
PITG_05604
Uncharacterized protein.
   
 
 0.448
PITG_13489
FAD_binding_3 domain-containing protein.
   
 
 0.448
PITG_16539
Uncharacterized protein.
   
 
 0.448
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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