STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_17894Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
PITG_00897
Uncharacterized protein.
    
 0.507
PITG_11348
Thioredoxin domain-containing protein.
    
 0.502
PITG_09345
40S ribosomal protein S5-2; Belongs to the universal ribosomal protein uS7 family.
    
 0.449
PITG_16212
Uncharacterized protein.
    
 0.448
PITG_14103
Uncharacterized protein.
    
 0.444
PITG_16429
Robl_LC7 domain-containing protein.
    
 0.441
PITG_01922
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.435
PITG_01996
Transcription factor, putative.
    
 0.435
PITG_12947
40S ribosomal protein S23, putative.
    
 0.434
PITG_19999
40S ribosomal protein S14.
   
 0.434
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 403677
Other names: P. infestans T30-4, Phytophthora infestans T30-4, Phytophthora infestans strain T30-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.