STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cytACytA protein. (326 aa)    
Predicted Functional Partners:
ccoP
Cb-type cytochrome c oxidase subunit III.
 
 
 0.961
CDS91373.1
Cytochrome c family protein.
 
 
 0.960
CDT07803.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.954
CDT07814.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.954
CDT28332.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.954
ccoN
Cb-type cytochrome c oxidase subunit I.
 
 
 0.937
CDT07776.1
Cytochrome c oxidase subunit 2.
   
 0.930
CDS93962.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.871
CDS93961.1
BexD/CtrA/VexA family capsule polysaccharide export protein.
 
     0.829
CDT03980.1
Cytochrome bd ubiquinol oxidase subunit I.
 
  
 0.816
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.