STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDS94155.1Putative N6-adenine-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (393 aa)    
Predicted Functional Partners:
CDS94159.1
HD domain protein.
       0.818
ispU
Undecaprenyl pyrophosphate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.733
pnp
Polynucleotide phosphorylase/polyadenylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.705
CDS94151.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.672
pyrG
CTP synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.583
ribD
Riboflavin biosynthesis protein RibD.
     
 0.467
CDS91686.1
Ribosome maturation factor RimM (fragment).
   
    0.465
CDS91342.1
Pseudouridine synthase (fragment).
  
 
 0.451
rimP
Ribosome maturation factor RimP.
  
    0.444
leuS
Leucine--tRNA ligase.
   
   0.416
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.