STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDS94592.1Endo-beta-galactosidase (fragment). (284 aa)    
Predicted Functional Partners:
CDS94585.1
Putative RagB/SusD domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.648
CDS94589.1
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.648
CDS94584.1
Beta-N-acetylhexosaminidase.
 
  
  0.604
yesW
Rhamnogalacturonan endolyase YesW.
 
  
 0.569
BN1088_1430054
TonB-dependent receptor plug (fragment).
 
   
  0.530
CDT05789.1
Glycosyl hydrolase (modular protein).
  
     0.476
neg
Glucosylceramidase.
 
   
 0.466
CDS96171.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.445
CDT16212.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
  0.433
CDS91967.1
Beta-glucosidase.
 
 0.428
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.