STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT02486.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (267 aa)    
Predicted Functional Partners:
CDS91745.1
Putative argininosuccinate synthase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.992
argB
Acetylglutamate kinase.
 
 
 0.933
argC
N-acetyl-gamma-glutamyl-phosphate reductase.
 
 
 0.928
CDT02909.1
N-acetylornithine carbamoyltransferase (fragment).
 
 
 0.924
argE
M20A family peptidase.
 
 
 0.890
argH
Argininosuccinate lyase.
 
 
 0.884
argD-2
Acetylornithine transaminase.
 
 
 0.871
hisI
Fused phosphoribosyl-AMP cyclohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
  0.632
pyrB
Aspartate carbamoyltransferase.
    
 0.572
gcp
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.571
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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