Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDS91491.1 | CDS93123.1 | BN1088_1260007 | BN1088_1431330 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Response regulator. | 0.789 |
CDS91491.1 | CDS93310.1 | BN1088_1260007 | BN1088_1431429 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.774 |
CDS91491.1 | CDT00029.1 | BN1088_1260007 | BN1088_1432661 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | LytTR family two component transcriptional regulator. | 0.789 |
CDS91491.1 | CDT04749.1 | BN1088_1260007 | BN1088_1433131 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Two-component response transcriptional regulator. | 0.790 |
CDS91491.1 | CDT05070.1 | BN1088_1260007 | BN1088_1433158 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.827 |
CDS91491.1 | CDT32779.1 | BN1088_1260007 | BN1088_860006 | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Response regulator. | 0.447 |
CDS92258.1 | CDT05070.1 | BN1088_1430662 | BN1088_1433158 | Response regulator of the LytR/AlgR family. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.828 |
CDS92258.1 | CDT32779.1 | BN1088_1430662 | BN1088_860006 | Response regulator of the LytR/AlgR family. | Response regulator. | 0.431 |
CDS93013.1 | CDT05070.1 | BN1088_1431269 | BN1088_1433158 | Putative Sensory transduction protein LytT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.827 |
CDS93013.1 | CDT32779.1 | BN1088_1431269 | BN1088_860006 | Putative Sensory transduction protein LytT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Response regulator. | 0.428 |
CDS93123.1 | CDS91491.1 | BN1088_1431330 | BN1088_1260007 | Response regulator. | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.789 |
CDS93123.1 | CDS93310.1 | BN1088_1431330 | BN1088_1431429 | Response regulator. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.790 |
CDS93123.1 | CDS93339.1 | BN1088_1431330 | BN1088_1431445 | Response regulator. | Two component transcriptional regulator, LytTR family. | 0.576 |
CDS93123.1 | CDT05070.1 | BN1088_1431330 | BN1088_1433158 | Response regulator. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.827 |
CDS93123.1 | CDT32779.1 | BN1088_1431330 | BN1088_860006 | Response regulator. | Response regulator. | 0.484 |
CDS93310.1 | CDS91491.1 | BN1088_1431429 | BN1088_1260007 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative Two component transcriptional regulator, LytTR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.774 |
CDS93310.1 | CDS93123.1 | BN1088_1431429 | BN1088_1431330 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Response regulator. | 0.790 |
CDS93310.1 | CDT05057.1 | BN1088_1431429 | BN1088_1433157 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.774 |
CDS93310.1 | CDT05070.1 | BN1088_1431429 | BN1088_1433158 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.828 |
CDS93310.1 | CDT32779.1 | BN1088_1431429 | BN1088_860006 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Response regulator. | 0.815 |
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