STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT18677.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (353 aa)    
Predicted Functional Partners:
CDT18669.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  0.959
CDS93123.1
Response regulator.
  
  0.859
CDT00029.1
LytTR family two component transcriptional regulator.
  
  0.859
CDT04749.1
Two-component response transcriptional regulator.
  
  0.859
CDT26574.1
Response regulator.
  
  0.857
CDT32779.1
Response regulator.
 
  0.838
CDS92258.1
Response regulator of the LytR/AlgR family.
  
  0.828
CDS93310.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  0.828
CDS93339.1
Two component transcriptional regulator, LytTR family.
  
  0.828
CDT05057.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  0.828
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.