STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT22385.1Uncharacterized 41.2 kDa protein in cps region (fragment). (100 aa)    
Predicted Functional Partners:
CDS94600.1
Glycosyl transferase group 1.
 
     0.660
tpsA
Putative alpha,alpha-trehalose-phosphate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.632
CDT06214.1
Mannosyltransferase.
  
     0.617
CDT34136.1
Putative group 1 glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.615
glgB
1,4-alpha-glucan branching enzyme; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.584
CDS92940.1
1,4-alpha-glucan branching enzyme.
   
 0.530
CDS94603.1
Glycosidase.
  
     0.520
rfbD
UDP-galactopyranose mutase.
  
 
 0.460
CDT04687.1
GlcNAc-PI de-N-acetylase.
  
 
  0.455
CDT01470.1
Glycosyl transferase family 2 (fragment).
    
 0.443
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.