STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT25019.1Group 2 glycosyl transferase. (343 aa)    
Predicted Functional Partners:
waaM
Lauroyl/myristoyl acyltransferase.
 
    0.870
CDT25042.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.735
CDS94001.1
dTDP-4-dehydrorhamnose reductase.
 
 
 0.720
rmlC
dTDP-4-deoxyrhamnose-3,5-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.657
CDS91496.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
 
 0.636
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.630
ribF
Putative FAD synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.624
CDS93631.1
dTDP-4-dehydrorhamnose reductase.
 
 
 0.616
rfbD
UDP-galactopyranose mutase.
  
 
 0.608
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 
 0.581
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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