Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDT07153.1 | CDT29785.1 | BN1088_1433355 | BN1088_680005 | Bacteroides conjugative transposon TraG-like protein. | Conjugate transposon protein TraN. | 0.710 |
CDT07153.1 | CDT29825.1 | BN1088_1433355 | BN1088_680009 | Bacteroides conjugative transposon TraG-like protein. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.800 |
CDT07153.1 | CDT29833.1 | BN1088_1433355 | BN1088_680010 | Bacteroides conjugative transposon TraG-like protein. | Conjugative transposon TraJ protein (fragment). | 0.762 |
CDT10462.1 | CDT29764.1 | BN1088_1433652 | BN1088_680003 | Protein found in conjugate transposon. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.523 |
CDT10462.1 | CDT29775.1 | BN1088_1433652 | BN1088_680004 | Protein found in conjugate transposon. | Conjugative transposon protein TraO. | 0.548 |
CDT10462.1 | CDT29785.1 | BN1088_1433652 | BN1088_680005 | Protein found in conjugate transposon. | Conjugate transposon protein TraN. | 0.774 |
CDT10462.1 | CDT29797.1 | BN1088_1433652 | BN1088_680006 | Protein found in conjugate transposon. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.694 |
CDT10462.1 | CDT29825.1 | BN1088_1433652 | BN1088_680009 | Protein found in conjugate transposon. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.809 |
CDT10462.1 | CDT29833.1 | BN1088_1433652 | BN1088_680010 | Protein found in conjugate transposon. | Conjugative transposon TraJ protein (fragment). | 0.777 |
CDT25293.1 | CDT29764.1 | BN1088_360007 | BN1088_680003 | Type IV secretory pathway VirB4 components-like protein. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.537 |
CDT25293.1 | CDT29775.1 | BN1088_360007 | BN1088_680004 | Type IV secretory pathway VirB4 components-like protein. | Conjugative transposon protein TraO. | 0.562 |
CDT25293.1 | CDT29785.1 | BN1088_360007 | BN1088_680005 | Type IV secretory pathway VirB4 components-like protein. | Conjugate transposon protein TraN. | 0.774 |
CDT25293.1 | CDT29797.1 | BN1088_360007 | BN1088_680006 | Type IV secretory pathway VirB4 components-like protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.702 |
CDT25293.1 | CDT29825.1 | BN1088_360007 | BN1088_680009 | Type IV secretory pathway VirB4 components-like protein. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.809 |
CDT25293.1 | CDT29833.1 | BN1088_360007 | BN1088_680010 | Type IV secretory pathway VirB4 components-like protein. | Conjugative transposon TraJ protein (fragment). | 0.777 |
CDT28806.1 | CDT28820.1 | BN1088_600003 | BN1088_600004 | Conjugation system ATPase, TraG family (fragment). | Conjugation system ATPase, TraG family (fragment). | 0.991 |
CDT28806.1 | CDT29785.1 | BN1088_600003 | BN1088_680005 | Conjugation system ATPase, TraG family (fragment). | Conjugate transposon protein TraN. | 0.769 |
CDT28806.1 | CDT29797.1 | BN1088_600003 | BN1088_680006 | Conjugation system ATPase, TraG family (fragment). | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.583 |
CDT28806.1 | CDT29825.1 | BN1088_600003 | BN1088_680009 | Conjugation system ATPase, TraG family (fragment). | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.808 |
CDT28806.1 | CDT29833.1 | BN1088_600003 | BN1088_680010 | Conjugation system ATPase, TraG family (fragment). | Conjugative transposon TraJ protein (fragment). | 0.776 |
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