STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT29825.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (207 aa)    
Predicted Functional Partners:
CDT29833.1
Conjugative transposon TraJ protein (fragment).
   
 0.943
CDT29797.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     0.941
CDT29785.1
Conjugate transposon protein TraN.
 
   
 0.889
CDT29764.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.814
CDT10462.1
Protein found in conjugate transposon.
 
 
 0.809
CDT25293.1
Type IV secretory pathway VirB4 components-like protein.
 
 
 0.809
CDT28820.1
Conjugation system ATPase, TraG family (fragment).
 
 
 0.809
CDT28806.1
Conjugation system ATPase, TraG family (fragment).
 
 
 0.808
CDT07153.1
Bacteroides conjugative transposon TraG-like protein.
 
 
 0.800
CDT29775.1
Conjugative transposon protein TraO.
 
     0.783
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
Server load: low (20%) [HD]