STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0021Hypothetical protein. (171 aa)    
Predicted Functional Partners:
Pmob_0022
Hypothetical protein.
       0.782
Pmob_0018
PFAM: Patatin; KEGG: tpt:Tpet_0218 patatin.
       0.773
Pmob_0019
PFAM: Patatin.
       0.773
Pmob_0020
PFAM: OstA family protein; KEGG: tpt:Tpet_0216 protein of unknown function DUF1239.
       0.773
Pmob_0015
PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: tpt:Tpet_0220 transcriptional regulator, MarR family.
       0.732
Pmob_0016
Hypothetical protein; KEGG: tma:TM0841 S-layer-like array protein.
       0.732
Pmob_0017
Hypothetical protein; KEGG: tva:TVAG_458080 viral A-type inclusion protein, putative Pfam: Ank CHASE3 TPR_MLP1_2 Filament Apolipoprotein EzrA Laminin_I DUF1217 Myosin_tail_1 DASH_Duo1 Pox_A_type_inc SYF2 Prefoldin DUF904 Rab5-bind BRE1 Osmo_CC Spectrin FliD_C Fez1 SRP_SPB Tektin Tropomyosin HalX HALZ HrpB7 Prefoldin_2 Type_III_YscP CSE2 bZIP_Maf PROSITE: ASN_RICH.
       0.732
Pmob_0023
Hypothetical protein.
       0.693
Pmob_0024
PFAM: phosphoribosyltransferase; KEGG: tma:TM1584 comFC protein, putative.
       0.692
Pmob_0014
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: tme:Tmel_1353 MATE efflux family protein.
       0.441
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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