STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0063PFAM: FMN-binding domain protein; KEGG: fno:Fnod_0630 FMN-binding domain protein. (203 aa)    
Predicted Functional Partners:
Pmob_0062
PFAM: NQR2 and RnfD family protein; KEGG: fno:Fnod_0629 NQR2 and RnfD family protein.
 
 
 0.991
Pmob_0064
PFAM: RnfA-Nqr electron transport subunit; KEGG: tme:Tmel_0650 RnfA-Nqr electron transport subunit; Belongs to the NqrDE/RnfAE family.
 
 
 0.991
Pmob_0066
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: fno:Fnod_0633 NADH:ubiquinone oxidoreductase, subunit F.
 
 
 0.985
rnfA
RnfA-Nqr electron transport subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.948
Pmob_0067
KEGG: fno:Fnod_0634 hypothetical protein.
       0.721
Pmob_0068
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.628
Pmob_0069
TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: tme:Tmel_1927 carbamate kinase; Belongs to the carbamate kinase family.
       0.628
Pmob_0061
KEGG: tpt:Tpet_0959 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; pullanase-associated protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
       0.479
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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