STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0201PFAM: diacylglycerol kinase; KEGG: tte:TTE0973 Diacylglycerol kinase. (151 aa)    
Predicted Functional Partners:
Pmob_0618
PFAM: phosphatidate cytidylyltransferase; KEGG: fno:Fnod_1500 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.917
Pmob_0186
TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: tme:Tmel_0129 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.912
Pmob_0598
PFAM: glycosyl transferase group 1; KEGG: fno:Fnod_1696 glycosyl transferase group 1.
    
 0.903
Pmob_1293
PFAM: glycosyl transferase group 1; KEGG: cth:Cthe_2338 glycosyl transferase, group 1.
    
 0.903
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: amt:Amet_2855 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.826
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.804
Pmob_0283
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tpt:Tpet_1362 FAD dependent oxidoreductase.
     
  0.800
Pmob_0302
PFAM: 3-dehydroquinate synthase; KEGG: cbe:Cbei_2364 glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
     
  0.800
Pmob_0202
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_0514 pyruvate ferredoxin/flavodoxin oxidoreductase.
       0.794
Pmob_0203
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tme:Tmel_1767 thiamine pyrophosphate enzyme domain protein TPP-binding.
       0.794
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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