STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0278PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0389 putative ABC-2 type transport system ATP-binding protein. (308 aa)    
Predicted Functional Partners:
Pmob_0276
PFAM: ABC-2 type transporter; KEGG: tma:TM0387 putative ABC-2 type transport system permease protein.
 
  
 0.959
Pmob_0277
PFAM: ABC-2 type transporter; KEGG: tpt:Tpet_0539 ABC-2 type transporter.
 
  
 0.954
Pmob_0813
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0569 protein of unknown function DUF214.
 
    
 0.805
Pmob_0267
PFAM: inner-membrane translocator; KEGG: tpt:Tpet_1608 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.729
Pmob_0279
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: tme:Tmel_0830 MATE efflux family protein.
  
  
 0.710
Pmob_0504
PFAM: alpha/beta hydrolase fold; inner-membrane translocator; PGAP1 family protein; KEGG: fno:Fnod_0527 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.691
Pmob_1655
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smr:Smar_1543 polar amino acid ABC transporter, inner membrane subunit.
      0.646
Pmob_1185
KEGG: tme:Tmel_0456 hypothetical protein.
  
 
 0.613
Pmob_0512
PFAM: inner-membrane translocator; KEGG: dge:Dgeo_0801 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
      0.575
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.432
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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