STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0403Hypothetical protein; KEGG: mhu:Mhun_1291 mucin 2, intestinal/tracheal. (938 aa)    
Predicted Functional Partners:
Pmob_0404
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cbf:CLI_1631 transcriptional regulator, LuxR family.
 
     0.895
Pmob_0402
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tme:Tmel_0311 tetratricopeptide TPR_2 repeat protein.
 
     0.823
Pmob_1550
Hypothetical protein; KEGG: mhu:Mhun_0418 PKD.
 
   
 0.780
Pmob_1611
LVIVD repeat protein; PFAM: Fibronectin type III domain protein; LVIVD repeat protein; KEGG: mma:MM_0391 hypothetical protein.
  
     0.774
Pmob_1087
Hypothetical protein; KEGG: rba:RB13291 general secretion pathway protein D (outD); Belongs to the bacterial secretin family.
 
     0.773
Pmob_1716
PFAM: Peptidoglycan-binding LysM; peptidase M23B; 3D domain protein; KEGG: tme:Tmel_1557 peptidoglycan-binding LysM.
  
   
 0.764
Pmob_1372
PFAM: Lytic transglycosylase catalytic; KEGG: mxa:MXAN_4628 transglycosylase SLT domain protein.
  
   
 0.758
Pmob_1613
PFAM: polysaccharide export protein; KEGG: tme:Tmel_0660 polysaccharide export protein.
  
     0.753
Pmob_0171
Hypothetical protein; KEGG: cac:CAC0649 uncharacterized protein, homolog of Thermotoga maritima (4982386).
  
     0.744
Pmob_1235
Hypothetical protein; KEGG: gfo:GFO_1492 3-dehydroquinate synthase.
  
     0.744
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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