Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Pmob_0407 | Pmob_0408 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | PFAM: protein of unknown function DUF87; KEGG: bfr:BF0638 hypothetical protein. | 0.915 |
Pmob_0407 | Pmob_0409 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | KEGG: mma:MM_0197 hypothetical protein. | 0.756 |
Pmob_0407 | Pmob_1241 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | PFAM: protein of unknown function UPF0150; KEGG: swo:Swol_1009 hypothetical protein. | 0.457 |
Pmob_0407 | Pmob_1936 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_1546 TPR repeat. | 0.557 |
Pmob_0408 | Pmob_0407 | PFAM: protein of unknown function DUF87; KEGG: bfr:BF0638 hypothetical protein. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.915 |
Pmob_0408 | Pmob_0409 | PFAM: protein of unknown function DUF87; KEGG: bfr:BF0638 hypothetical protein. | KEGG: mma:MM_0197 hypothetical protein. | 0.756 |
Pmob_0409 | Pmob_0407 | KEGG: mma:MM_0197 hypothetical protein. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.756 |
Pmob_0409 | Pmob_0408 | KEGG: mma:MM_0197 hypothetical protein. | PFAM: protein of unknown function DUF87; KEGG: bfr:BF0638 hypothetical protein. | 0.756 |
Pmob_1241 | Pmob_0407 | PFAM: protein of unknown function UPF0150; KEGG: swo:Swol_1009 hypothetical protein. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.457 |
Pmob_1936 | Pmob_0407 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_1546 TPR repeat. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bfr:BF0639 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.557 |