STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0421Hypothetical protein. (320 aa)    
Predicted Functional Partners:
Pmob_1070
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.503
Pmob_1898
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.503
Pmob_1071
PFAM: restriction modification system DNA specificity domain; KEGG: chy:CHY_0831 putative type I restriction-modification system, S subunit.
  
  
 0.501
Pmob_1897
PFAM: restriction modification system DNA specificity domain; KEGG: rrs:RoseRS_2689 restriction modification system DNA specificity domain.
  
  
 0.501
Pmob_0413
KEGG: cte:CT1443 hypothetical protein.
  
    0.453
Pmob_1244
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: pdi:BDI_2779 ATP-dependent DNA helicase.
  
    0.453
Pmob_1249
KEGG: csc:Csac_2678 putative transcriptional regulator.
  
    0.453
Pmob_1753
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: mhu:Mhun_2782 putative transcriptional regulator.
  
    0.453
Pmob_0469
KEGG: tpt:Tpet_0356 hypothetical protein.
  
    0.427
Pmob_1511
KEGG: tpt:Tpet_0356 hypothetical protein.
  
    0.427
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.