STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0478Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: llm:llmg_1460 putative di/TRI-peptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (320 aa)    
Predicted Functional Partners:
Pmob_0480
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_3095 chitooligosaccharide transport system permease protein.
  
 0.993
Pmob_1783
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tme:Tmel_1190 binding-protein-dependent transport systems inner membrane component.
  
 0.958
Pmob_0490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1555 binding-protein-dependent transport systems inner membrane component.
  
 0.957
Pmob_1577
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tme:Tmel_1734 binding-protein-dependent transport systems inner membrane component.
  
 0.940
Pmob_0481
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component.
  
 0.908
Pmob_1328
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0533 putative oligopeptide transport system permease protein.
  
 0.864
Pmob_0479
KEGG: smr:Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.828
Pmob_1052
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_1465 ABC transporter related.
    
0.793
Pmob_0476
PFAM: NLP/P60 protein; KEGG: pat:Patl_4171 NLP/P60.
  
  
 0.782
Pmob_0236
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0851 binding-protein-dependent transport systems inner membrane component.
  
 0.779
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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