Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0482PFAM: extracellular solute-binding protein family 5; KEGG: mxa:MXAN_6551 putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein. (531 aa)    
Predicted Functional Partners:
Pmob_0481
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component.
 
 
 0.942
Pmob_0480
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_3095 chitooligosaccharide transport system permease protein.
 
 
 0.941
Pmob_0489
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0893 binding-protein-dependent transport systems inner membrane component.
 
 
 0.850
Pmob_0237
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0852 binding-protein-dependent transport systems inner membrane component.
 
 
 0.839
Pmob_0490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1555 binding-protein-dependent transport systems inner membrane component.
 
 
 0.827
Pmob_0236
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0851 binding-protein-dependent transport systems inner membrane component.
 
 
 0.781
Pmob_0479
KEGG: smr:Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   0.770
Pmob_0478
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: llm:llmg_1460 putative di/TRI-peptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   0.759
Pmob_0476
PFAM: NLP/P60 protein; KEGG: pat:Patl_4171 NLP/P60.
       0.594
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.594
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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