STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0488PFAM: extracellular solute-binding protein family 5; KEGG: pfu:PF1209 oligopeptide ABC transporter (oligopeptide-binding protein). (576 aa)    
Predicted Functional Partners:
Pmob_0489
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0893 binding-protein-dependent transport systems inner membrane component.
 
 
 0.926
Pmob_0490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_1555 binding-protein-dependent transport systems inner membrane component.
 
 
 0.921
Pmob_0237
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0852 binding-protein-dependent transport systems inner membrane component.
 
 
 0.839
Pmob_0481
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component.
 
 
 0.832
Pmob_0480
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_3095 chitooligosaccharide transport system permease protein.
 
 
 0.810
Pmob_0236
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0851 binding-protein-dependent transport systems inner membrane component.
 
 
 0.795
Pmob_0491
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: pab:PAB0630 oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.748
Pmob_0492
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pab:PAB1347 dipeptide transport system ATP-binding protein.
 
  
 0.712
Pmob_0238
PFAM: extracellular solute-binding protein family 5; KEGG: tpt:Tpet_0853 extracellular solute-binding protein, family 5.
  
  
 
0.531
Pmob_0487
KEGG: fno:Fnod_1042 GCN5-related N-acetyltransferase.
 
     0.522
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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