Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Pmob_0499Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: fno:Fnod_1559 alanine racemase. (330 aa)    
Predicted Functional Partners:
Pmob_1794
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: drm:Dred_2805 glutamate synthase (ferredoxin).
    
 
 0.735
Pmob_0497
PFAM: glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1624 beta-mannosidase, putative; Belongs to the glycosyl hydrolase 2 family.
     
 0.721
Pmob_0498
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amt:Amet_4539 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.697
Pmob_0500
PFAM: peptidase M55 D-aminopeptidase; KEGG: fno:Fnod_1790 peptidase M55 D-aminopeptidase.
       0.655
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.606
Pmob_0496
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tpt:Tpet_0550 methyl-accepting chemotaxis sensory transducer.
       0.488
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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