Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0504PFAM: alpha/beta hydrolase fold; inner-membrane translocator; PGAP1 family protein; KEGG: fno:Fnod_0527 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (571 aa)    
Predicted Functional Partners:
Pmob_0505
PFAM: inner-membrane translocator; KEGG: fno:Fnod_0528 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
Pmob_0506
PFAM: ABC transporter related; KEGG: tde:TDE2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein.
 
 0.999
Pmob_0507
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH800 branched-chain amino acid ABC transporter ATP-binding protein.
 
 0.999
Pmob_0510
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2009 branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.998
Pmob_0266
PFAM: inner-membrane translocator; KEGG: cbe:Cbei_1763 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Pmob_0268
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_1607 ABC transporter related.
 
 0.997
Pmob_0269
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_1606 ABC transporter related.
 
 0.997
Pmob_0511
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA1196 branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.997
Pmob_0508
PFAM: Extracellular ligand-binding receptor; KEGG: fno:Fnod_0531 extracellular ligand-binding receptor.
 
 
 0.992
Pmob_0513
PFAM: inner-membrane translocator; KEGG: dge:Dgeo_0802 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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