STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0526KEGG: tte:TTE2409 hypothetical protein. (506 aa)    
Predicted Functional Partners:
Pmob_0522
HI0933 family protein; PFAM: glucose-inhibited division protein A; HI0933 family protein; KEGG: cbe:Cbei_3523 hypothetical protein.
 
     0.725
Pmob_0523
PFAM: extracellular solute-binding protein family 1; KEGG: tpt:Tpet_0118 extracellular solute-binding protein, family 1.
 
     0.668
Pmob_0914
PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1.
  
     0.559
Pmob_0525
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0812 multiple sugar transport system permease protein.
 
     0.524
Pmob_0311
KEGG: tme:Tmel_0921 hypothetical protein.
  
     0.523
Pmob_1074
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0224 protein of unknown function DUF214.
 
     0.512
Pmob_0520
PFAM: ROK family protein; putative N-acetylmannosamine-6-phosphate epimerase; KEGG: fnu:FN1476 N-acetylmannosamine-6-phosphate 2-epimerase.
 
     0.499
Pmob_0524
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_0261 probable sugar ABC transporter permease protein.
 
     0.494
Pmob_1812
PFAM: glycosyl transferase family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tpt:Tpet_0171 glycosyl transferase, family 2.
  
     0.417
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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