STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0543PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component. (250 aa)    
Predicted Functional Partners:
Pmob_0542
Hypothetical protein; KEGG: tte:TTE0849 putative ABC-2 type transport system permease protein.
 
    0.931
Pmob_1503
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsl:LSL_1407 cobalt transport ATP-binding protein.
 
   
0.878
Pmob_0544
PFAM: peptidase U32; KEGG: fnu:FN1826 protease.
  
    0.779
Pmob_0546
PFAM: protein of unknown function UPF0118; KEGG: tpt:Tpet_1566 protein of unknown function UPF0118.
     
 0.778
Pmob_0545
KEGG: fno:Fnod_1491 hypothetical protein.
       0.773
Pmob_0541
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; KEGG: bce:BC3133 putative hydrolase.
 
     0.712
Pmob_1185
KEGG: tme:Tmel_0456 hypothetical protein.
  
 
 0.613
Pmob_0506
PFAM: ABC transporter related; KEGG: tde:TDE2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein.
 
     
0.603
Pmob_0547
KEGG: tpt:Tpet_0934 hypothetical protein.
       0.598
Pmob_0548
Hypothetical protein.
       0.598
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.