STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0548Hypothetical protein. (159 aa)    
Predicted Functional Partners:
Pmob_0547
KEGG: tpt:Tpet_0934 hypothetical protein.
       0.773
Pmob_0542
Hypothetical protein; KEGG: tte:TTE0849 putative ABC-2 type transport system permease protein.
       0.598
Pmob_0543
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component.
       0.598
Pmob_0544
PFAM: peptidase U32; KEGG: fnu:FN1826 protease.
       0.598
Pmob_0545
KEGG: fno:Fnod_1491 hypothetical protein.
       0.598
Pmob_0546
PFAM: protein of unknown function UPF0118; KEGG: tpt:Tpet_1566 protein of unknown function UPF0118.
       0.598
Pmob_0541
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; KEGG: bce:BC3133 putative hydrolase.
       0.508
Pmob_0549
KEGG: tme:Tmel_1860 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
       0.406
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.