STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0571PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tme:Tmel_1614 metal dependent phosphohydrolase. (346 aa)    
Predicted Functional Partners:
Pmob_0572
PFAM: iron dependent repressor; FeoA family protein; KEGG: pab:PAB0714 iron-dependent repressor.
 
     0.816
Pmob_0538
KEGG: mgm:Mmc1_2227 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.783
Pmob_0859
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: fno:Fnod_1236 metal dependent phosphohydrolase.
  
     0.773
Pmob_0570
PFAM: peptidase M16 domain protein; KEGG: tpt:Tpet_1437 peptidase M16 domain protein.
       0.733
Pmob_1834
KEGG: tdn:Tmden_0645 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein.
 
 
 0.699
Pmob_1776
Diguanylate cyclase with GAF sensor; KEGG: fno:Fnod_0685 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GAF domain protein.
 
 
 0.693
Pmob_1669
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: fno:Fnod_0964 diguanylate cyclase.
 
 
 0.691
Pmob_0536
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tme:Tmel_0645 diguanylate cyclase.
 
 
 0.680
Pmob_0573
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.628
Pmob_0574
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: tme:Tmel_1527 phosphoesterase, RecJ domain protein.
     
 0.557
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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