Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0652TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: tpt:Tpet_1411 SUF system FeS assembly protein, NifU family. (145 aa)    
Predicted Functional Partners:
Pmob_0653
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.999
Pmob_0097
PFAM: aminotransferase class V; KEGG: tma:TM1692 aminotransferase, class V.
  
 0.998
Pmob_0654
PFAM: SufBD protein; KEGG: tme:Tmel_0049 SufBD protein.
 
  
 0.980
Pmob_0656
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: fno:Fnod_1259 FeS assembly ATPase SufC.
 
  
 0.977
Pmob_0655
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: tpt:Tpet_1414 FeS assembly protein SufB.
 
  
 0.970
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.928
Pmob_1674
PFAM: protein of unknown function DUF59; KEGG: tma:TM0487 hypothetical protein.
  
  
 0.842
Pmob_0651
PFAM: CoA-binding domain protein; KEGG: tma:TM1435 hypothetical protein.
       0.794
Pmob_0885
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tma:TM1217 glutamate synthase (NADPH) small chain.
  
  
 0.546
Pmob_0042
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cpr:CPR_1756 uncharacterized conserved protein of YjeB/RRF2 family.
  
  
 0.543
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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