Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0664Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: tte:TTE0438 predicted transcriptional regulator. (122 aa)    
Predicted Functional Partners:
Pmob_0662
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_0448 ABC transporter, ATP-binding protein.
 
  
 0.919
Pmob_0663
KEGG: fno:Fnod_0540 hypothetical protein.
       0.818
Pmob_0665
KEGG: chy:CHY_0445 hypothetical protein.
       0.800
Pmob_0667
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpe:Tpen_1400 daunorubicin resistance ABC transporter ATPase subunit.
  
  
 0.618
Pmob_0666
PFAM: ABC-2 type transporter; KEGG: tme:Tmel_0407 ABC-2 type transporter.
       0.534
Pmob_0661
KEGG: mta:Moth_2147 2-oxoisovalerate dehydrogenase, E1 component beta subunit.
       0.506
Pmob_1359
PFAM: Silent information regulator protein Sir2; KEGG: tpt:Tpet_0430 silent information regulator protein Sir2.
  
    0.432
Pmob_1554
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; regulatory protein DeoR; UbiC transcription regulator-associated domain protein; KEGG: bce:BC4053 transcriptional regulator, GntR family.
 
  
 0.420
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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