STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0671PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2435 ABC transporter related. (310 aa)    
Predicted Functional Partners:
Pmob_1504
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1763 ABC transporter related.
 
   
0.880
Pmob_1126
Glycine betaine/L-proline ABC transporter, ATPase subunit; KEGG: cpf:CPF_0537 glycine betaine/L-proline transport, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 
    
0.878
Pmob_0672
Hypothetical protein.
       0.741
Pmob_0492
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pab:PAB1347 dipeptide transport system ATP-binding protein.
    
0.737
Pmob_1769
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tpt:Tpet_1495 ABC transporter related.
 
    
0.674
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
    0.619
Pmob_1185
KEGG: tme:Tmel_0456 hypothetical protein.
  
 
 0.613
Pmob_0479
KEGG: smr:Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    
0.533
Pmob_0040
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_1090 ABC transporter related.
   
0.526
Pmob_1784
KEGG: tpt:Tpet_1598 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    
0.524
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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