STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0700PFAM: beta-lactamase domain protein; KEGG: tpt:Tpet_0910 beta-lactamase domain protein. (257 aa)    
Predicted Functional Partners:
Pmob_0699
PFAM: chemotaxis sensory transducer; KEGG: fno:Fnod_0355 methyl-accepting chemotaxis sensory transducer.
     
 0.801
Pmob_0698
PFAM: HI0933 family protein; KEGG: dsy:DSY2873 hypothetical protein.
       0.658
mggS
Glycosyl transferase group 1; Involved in the biosynthesis of the compatible solute mannosylglucosylglycerate through a nonphosphorylating pathway. Catalyzes the synthesis of mannosylglucosylglycerate (MGG) from glucosylglycerate (GG) and GDP-mannose.
       0.586
Pmob_1631
PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: fno:Fnod_0468 desulfoferrodoxin ferrous iron-binding region.
  
  
 0.549
Pmob_0701
PFAM: basic membrane lipoprotein; KEGG: tpt:Tpet_0822 basic membrane lipoprotein.
       0.523
Pmob_0696
PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: tme:Tmel_0322 methyl-accepting chemotaxis sensory transducer.
     
 0.418
Pmob_0695
Hypothetical protein.
       0.411
Pmob_0283
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tpt:Tpet_1362 FAD dependent oxidoreductase.
  
  
 0.407
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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