Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0723TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: cbf:CLI_1849 [Fe] hydrogenase. (578 aa)    
Predicted Functional Partners:
Pmob_1150
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tme:Tmel_1168 NADH dehydrogenase (quinone).
 
 0.996
Pmob_1151
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tpt:Tpet_0697 NADH-quinone oxidoreductase, E subunit.
 0.996
Pmob_0726
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_3292 NADH dehydrogenase (ubiquinone), 24 kDa subunit.
 
 0.991
Pmob_0725
KEGG: amt:Amet_0639 NADH dehydrogenase (quinone).
 
 
 0.988
Pmob_0885
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tma:TM1217 glutamate synthase (NADPH) small chain.
 
 
 0.982
Pmob_0724
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tpt:Tpet_0913 NADH dehydrogenase (quinone).
 
 
 0.980
Pmob_0889
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: fno:Fnod_1740 respiratory-chain NADH dehydrogenase subunit 1.
  
 0.947
Pmob_0891
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tme:Tmel_1216 NADH/ubiquinone/plastoquinone (complex I).
  
 0.930
Pmob_0887
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: fno:Fnod_1738 NADH dehydrogenase (ubiquinone) 30 kDa subunit.
  
 
 0.924
Pmob_0888
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fno:Fnod_1739 NADH ubiquinone oxidoreductase 20 kDa subunit.
  
 
 0.920
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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