Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0728PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH03642 probable oxidoreductase protein. (364 aa)    
Predicted Functional Partners:
Pmob_0727
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oan:Oant_3410 oxidoreductase domain protein.
 
    
0.690
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tpt:Tpet_1001 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.639
Pmob_0729
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pla:Plav_1760 short-chain dehydrogenase/reductase SDR.
  
  
 0.573
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.526
Pmob_0726
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: drm:Dred_3292 NADH dehydrogenase (ubiquinone), 24 kDa subunit.
  
    0.427
Pmob_0725
KEGG: amt:Amet_0639 NADH dehydrogenase (quinone).
       0.407
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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