Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0739PFAM: conserved hypothetical protein; KEGG: fno:Fnod_0184 hypothetical protein. (351 aa)    
Predicted Functional Partners:
Pmob_0738
PFAM: glycosyl transferase group 1; KEGG: cac:CAC3015 glycosyltransferase.
 
    0.860
Pmob_0737
KEGG: tma:TM0461 DNA polymerase III, alpha subunit, putative; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit.
       0.708
lspA-2
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.685
Pmob_0736
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.681
Pmob_1837
PFAM: NolW domain protein; KEGG: tpt:Tpet_1626 type II and III secretion system protein; Belongs to the bacterial secretin family.
  
     0.563
Pmob_0598
PFAM: glycosyl transferase group 1; KEGG: fno:Fnod_1696 glycosyl transferase group 1.
 
    0.486
Pmob_0563
PFAM: protein of unknown function DUF107; KEGG: tpt:Tpet_0062 protein of unknown function DUF107.
  
     0.429
Pmob_0878
KEGG: tme:Tmel_1841 hypothetical protein.
  
     0.429
Pmob_0079
TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fno:Fnod_1289 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.416
Pmob_1074
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0224 protein of unknown function DUF214.
 
     0.413
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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